A simple BLAST interface for various Drosophila genomes

Note: I cannot promise that this is current. I'll try.

Be warned that long queries may timeout your browser.

Also, be warned that everything here is preliminary and that not all contigs will remain as they are presently assembled.

These assemblies are NOT public domain yet, although they eventually will be and the trace files can be found at NCBI.


This site has been depreciated in favor of the flybase site

Other Useful Links:

D. simulans BLAST for all lines.

Some tools for, and analysis of Drosophila data.


Please contact me (Corbin) if you have questions.

11/24 updated refs seqs.-cdj

1/10 Sorry about the crashes!!-cdj

9/1/05 Depreciated-cdj

(optional) A name for this search?

Enter sequence:

What type of sequence?

Which database to use?

Which blast program to use?


change log:

very much still under development -- send love and/or hate to Corbin Jones (be sure to replace the "_at_" with @ )(cdjones_at_email.unc.edu) .

10/1/04 -- Initial set up.

11/23/04 -- added new assemblies